Algorithm improves detection of differentially expressed genes in large single-cell trajectory data sets

Researchers have developed a new algorithm to improve the identification of differentially expressed genes in large-scale single-cell RNA sequencing data. This method addresses challenges in analyzing complex cellular trajectories and dynamic gene expression patterns.
Why it matters
Enhanced gene expression analysis allows for more precise biological insights into cellular development and disease progression, potentially accelerating medical research.
edited by Lisa Lock , reviewed by Robert Egan
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Add as preferred source Credit: Nucleic Acids Research (2026). DOI: 10.1093/nar/gkag682 Single-cell RNA sequencing (scRNA-seq) is a method for measuring gene expression in individual cells, allowing observation of various cellular processes, including cell differentiation, the cell cycle and stimulus response, for each unique cell instead of averaging across millions of cells. It provides high-resolution snapshots of biological processes. However, it does not track the same cell continuously over time. To address this limitation, trajectory inference approaches have been developed that computationally arrange cellular snapshots along an inferred developmental trajectory known as pseudotime.
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